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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
444
total RNA-seq
84
RNA microarray
82
ChIP-seq
8
ATAC-seq
6
single cell RNA-seq
3
snDrop-seq
Assay category
450
Transcription
82
DNA binding
8
DNA accessibility
Target of assay
70
histone
70
histone modification
42
broad histone mark
28
narrow histone mark
12
control
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
0
September, 2018
Available data
521
bam
501
bigWig
452
tsv
89
txt
66
bed narrowPeak
66
tagAlign
57
bigBed narrowPeak
6
bed broadPeak
6
csv
Organism
627
Homo sapiens
Biosample type
627
tissue
411
cell line
130
primary cell
26
in vitro differentiated cells
Organ
444
connective tissue
386
adipose tissue
150
bone element
82
brain
8
kidney
8
skeleton
6
limb
1
liver
Project
627
AMP
Genome assembly (visualization)
509
GRCh38
458
hg19
Lab
627
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
5
audit script error
month_released!
July, 2018
BIOSAMPLE
ASSAY
627 results
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Clear Filters
total RNA-seq
RNA microarray
ChIP-seq
ATAC-seq
single cell RNA-seq
snDrop-seq
tissue
adipose tissue
381
bone element
84
bone tissue
58
layer of hippocampus
22
caudate nucleus
15
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