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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
156
total RNA-seq
79
ATAC-seq
50
ChIP-seq
2
snATAC-seq
1
single cell RNA-seq
Assay category
157
Transcription
81
DNA accessibility
50
DNA binding
Target of assay
27
histone
27
histone modification
27
narrow histone mark
23
control
Date released
539
February, 2021
282
August, 2017
229
August, 2021
193
May, 2020
173
October, 2019
131
June, 2019
120
July, 2018
104
May, 2019
95
February, 2023
82
November, 2017
76
April, 2019
72
July, 2019
66
May, 2022
63
October, 2018
47
September, 2023
46
December, 2017
40
March, 2020
40
May, 2021
40
November, 2019
35
May, 2024
26
November, 2018
23
October, 2017
22
February, 2020
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
193
bam
170
bigWig
147
tsv
90
bed narrowPeak
50
tagAlign
5
bed bed3
4
txt
Organism
288
Homo sapiens
Biosample type
288
tissue
235
primary cell
16
in vitro differentiated cells
7
cell line
Organ
193
liver
36
heart
35
artery
35
blood vessel
35
vasculature
31
eye
18
pancreas
14
epithelium
8
bone element
8
skeleton
1
adipose tissue
1
brain
1
connective tissue
Project
270
AMP
18
T1D
Genome assembly (visualization)
203
hg19
197
GRCh38
Lab
270
AMP-T2D consortium
18
Kyle Gaulton, UCSD
organ_slims!
limb
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
288 results
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total RNA-seq
ATAC-seq
ChIP-seq
snATAC-seq
single cell RNA-seq
tissue
liver
143
50
coronary artery
35
islet of Langerhans
5
11
2
retina
2
15
pigmented layer of retina
2
12
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