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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
99
ATAC-seq
32
total RNA-seq
2
snATAC-seq
1
Hi-C
1
single cell RNA-seq
Assay category
101
DNA accessibility
33
Transcription
1
3D chromatin structure
Date released
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
83
bed narrowPeak
39
bam
23
tsv
19
bigWig
5
bed bed3
4
txt
1
bedpe bed3+
1
hic
Organism
135
Homo sapiens
Biosample type
135
tissue
88
primary cell
22
cell line
21
in vitro differentiated cells
Organ
57
pancreas
36
heart
35
artery
35
blood vessel
35
vasculature
31
eye
14
epithelium
8
bone element
8
skeleton
2
adipose tissue
2
connective tissue
1
brain
Project
117
AMP
18
T1D
Genome assembly (visualization)
74
GRCh38
73
hg19
Lab
117
AMP-T2D consortium
18
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
month_released!
February, 2021
BIOSAMPLE
ASSAY
135 results
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Clear Filters
ATAC-seq
total RNA-seq
snATAC-seq
Hi-C
single cell RNA-seq
tissue
islet of Langerhans
30
24
2
1
coronary artery
35
retina
15
2
pigmented layer of retina
12
2
acetabular part of hip bone
1
1
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