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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
total RNA-seq
15
small RNA-seq
10
WGBS
5
RRBS
4
ATAC-seq
4
Hi-C
1
FAIRE-seq
Assay category
42
Transcription
15
DNA methylation
5
DNA accessibility
4
3D chromatin structure
Date released
537
February, 2021
284
August, 2017
212
October, 2019
193
May, 2020
120
July, 2018
95
August, 2021
92
June, 2019
82
November, 2017
74
October, 2018
66
July, 2019
66
May, 2022
65
May, 2019
60
February, 2023
57
April, 2019
48
December, 2017
40
May, 2021
40
May, 2024
40
November, 2019
37
March, 2020
26
November, 2018
23
October, 2017
22
February, 2020
19
April, 2020
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
2
January, 2018
1
August, 2022
May, 2023
Available data
54
bam
54
bigWig
42
tsv
12
bed bedMethyl
12
bigBed bedMethyl
4
bed narrowPeak
1
bigBed narrowPeak
Organism
66
Homo sapiens
Biosample type
66
tissue
20
primary cell
Organ
20
heart
11
brain
10
adipose tissue
10
connective tissue
8
liver
blood vessel
7
musculature of body
7
vasculature
6
pancreas
5
limb
kidney
1
artery
1
pericardium
Project
66
AMP
Genome assembly (visualization)
53
GRCh38
51
hg19
Lab
66
AMP-T2D consortium
month_released!
May, 2023
organ_slims!
blood vessel
kidney
BIOSAMPLE
ASSAY
66 results
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total RNA-seq
small RNA-seq
WGBS
RRBS
ATAC-seq
Hi-C
FAIRE-seq
tissue
heart left ventricle
2
4
1
2
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
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