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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
117
ChIP-seq
28
total RNA-seq
22
ATAC-seq
20
pCHi-C
8
Hi-C
Assay category
117
DNA binding
28
Transcription
22
DNA accessibility
8
3D chromatin structure
Target of assay
91
histone
91
histone modification
56
broad histone mark
35
narrow histone mark
22
control
4
RNA binding protein
4
transcription factor
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
76
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
163
bam
123
bigWig
115
bed narrowPeak
93
bigBed narrowPeak
47
tsv
8
bedpe bed3+
8
hic
Organism
195
Homo sapiens
Biosample type
195
tissue
27
cell line
13
in vitro differentiated cells
6
primary cell
4
stem cell
Organ
53
blood vessel
53
vasculature
50
pancreas
30
brain
28
heart
12
musculature of body
7
limb
5
artery
3
liver
2
adipose tissue
2
connective tissue
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
191
AMP
4
T1D
Genome assembly (visualization)
151
hg19
140
GRCh38
Lab
195
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
pericardium
BIOSAMPLE
ASSAY
195 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
Hi-C
tissue
islet of Langerhans
2
21
21
1
aorta
13
1
1
1
ascending aorta
16
thoracic aorta
16
temporal lobe
15
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