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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
160
ChIP-seq
18
total RNA-seq
15
ATAC-seq
4
pCHi-C
2
DNase-seq
1
Hi-C
Assay category
160
DNA binding
18
Transcription
17
DNA accessibility
1
3D chromatin structure
Target of assay
144
histone
144
histone modification
121
narrow histone mark
23
broad histone mark
16
control
Date released
545
February, 2021
284
August, 2017
229
August, 2021
200
October, 2019
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
November, 2019
26
November, 2018
24
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
144
bam
129
bigWig
124
bed narrowPeak
49
tagAlign
21
bigBed narrowPeak
4
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
bedpe bed3+
1
hic
1
tagAlign bed3+
Organism
200
Homo sapiens
Biosample type
200
tissue
34
primary cell
30
cell line
8
in vitro differentiated cells
Organ
86
brain
69
limb
nerve
26
artery
26
blood vessel
26
vasculature
21
eye
8
heart
6
liver
4
gonad
4
kidney
4
ovary
3
pancreas
2
connective tissue
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
200
AMP
Genome assembly (visualization)
132
hg19
130
GRCh38
Lab
200
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
November, 2019
organ_slims!
nerve
BIOSAMPLE
ASSAY
200 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
DNase-seq
Hi-C
tissue
islet of Langerhans
21
14
13
4
tibial artery
23
1
2
heart
5
2
1
brain
5
1
liver
5
1
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