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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
194
ChIP-seq
22
total RNA-seq
15
ATAC-seq
4
DNase-seq
4
pCHi-C
1
Hi-C
Assay category
194
DNA binding
22
Transcription
19
DNA accessibility
1
3D chromatin structure
Target of assay
167
histone
167
histone modification
128
narrow histone mark
39
broad histone mark
27
control
Date released
395
February, 2021
284
August, 2017
240
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
87
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
185
bam
159
bigWig
150
bed narrowPeak
48
tagAlign
47
bigBed narrowPeak
8
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bedpe bed3+
1
hic
1
tagAlign bed3+
Organism
240
Homo sapiens
Biosample type
240
tissue
34
primary cell
30
cell line
8
in vitro differentiated cells
Organ
86
brain
69
limb
42
nerve
26
artery
26
blood vessel
26
vasculature
21
eye
8
heart
6
liver
4
gonad
4
kidney
4
ovary
3
pancreas
2
connective tissue
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
240
AMP
Genome assembly (visualization)
162
hg19
160
GRCh38
Lab
240
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
bone element
pituitary gland
BIOSAMPLE
ASSAY
240 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
pCHi-C
Hi-C
tissue
islet of Langerhans
21
14
12
4
tibial nerve
35
4
1
2
tibial artery
23
1
2
heart
5
2
1
brain
5
1
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