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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 195ChIP-seq
  • 22total RNA-seq
  • 16ATAC-seq
  • 4DNase-seq
  • 4pCHi-C
  • 1Hi-C
Assay category
  • 195DNA binding
  • 22Transcription
  • 20DNA accessibility
  • 13D chromatin structure
Target of assay
  • 168histone
  • 168histone modification
  • 129narrow histone mark
  • 39broad histone mark
  • 27control
Date released
  • 545February, 2021
  • 284August, 2017
  • 242October, 2019
  • 229August, 2021
  • 193May, 2020
  • 163June, 2019
  • 120July, 2018
  • 115May, 2019
  • 95February, 2023
  • 82November, 2017
  • 80April, 2019
  • 77July, 2019
  • 74October, 2018
  • 66May, 2022
  • 48December, 2017
  • 47September, 2023
  • 40March, 2020
  • 40May, 2021
  • 40May, 2024
  • 40November, 2019
  • 26November, 2018
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 15May, 2023
  • 8January, 2021
  • 7December, 2018
  • 7January, 2019
  • 6April, 2018
  • 6September, 2017
  • 5March, 2019
  • 4November, 2020
  • 3December, 2019
  • 2January, 2018
  • 1August, 2022
Available data
  • 186bam
  • 160bigWig
  • 151bed narrowPeak
  • 49tagAlign
  • 47bigBed narrowPeak
  • 8tsv
  • 4bed bed3+
  • 4bed broadPeak
  • 4bigBed broadPeak
  • 1bedpe bed3+
  • 1hic
  • 1tagAlign bed3+
Organism
  • 242Homo sapiens
Biosample type
  • 242tissue
  • 34primary cell
  • 30cell line
  • 8in vitro differentiated cells
Organ
  • 86brain
  • 69limb
  • 42nerve
  • 26artery
  • 26blood vessel
  • 26vasculature
  • 21eye
  • 8heart
  • 6liver
  • 4gonad
  • 4kidney
  • 4ovary
  • 3pancreas
  • 2connective tissue
  • 2pituitary gland
  • 1adipose tissue
  • 1lymph node
  • 1skin of body
Project
  • 242AMP
Genome assembly (visualization)
  • 163hg19
  • 161GRCh38
Lab
  • 242AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
BIOSAMPLE
ASSAY

242 results

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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
pCHi-C
Hi-C
tissue
islet of Langerhans2114134
tibial nerve35412
tibial artery2312
heart521
brain51
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