Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
793
candidate regulatory elements
439
target gene predictions
425
chromatin state
169
accessible chromatin
88
gene expression
83
eQTL
44
histone modifications
38
Fine-mapped variants
38
variant allelic effects
30
binding sites
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
Date released
1158
September, 2022
518
February, 2021
65
March, 2020
48
May, 2020
47
June, 2020
46
August, 2021
41
January, 2020
36
January, 2022
30
February, 2020
28
May, 2021
26
February, 2023
26
February, 2024
23
March, 2024
17
November, 2022
12
August, 2017
9
November, 2019
8
April, 2019
6
March, 2023
5
May, 2019
5
October, 2019
3
September, 2018
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
Available data
1538
bed bed3+
407
bed bed9
142
tsv
108
bigWig
25
bigBed bed9
1
bam
Organism
2163
Homo sapiens
Biosample type
2424
primary cell
2268
cell line
2164
tissue
466
in vitro differentiated cells
3
stem cell
Organ
brain
306
musculature of body
301
kidney
236
limb
232
intestine
214
heart
181
lung
134
large intestine
114
pancreas
stomach
98
extraembryonic component
95
connective tissue
84
adipose tissue
84
blood vessel
84
vasculature
80
small intestine
70
eye
64
ureter
62
adrenal gland
61
epithelium
60
placenta
58
liver
48
thymus
42
artery
39
gonad
36
spinal cord
35
embryo
35
esophagus
34
spleen
25
nerve
25
skin of body
22
bone element
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
testis
15
prostate gland
breast
13
uterus
11
mouth
10
tongue
10
urinary bladder
10
vagina
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
2159
AMP
5
ITG
Genome assembly (visualization)
2019
hg19
575
GRCh38
3
hg18
organ_slims!
brain
breast
stomach
testis
BIOSAMPLE
TYPE
2164 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
eQTL
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
differential activity
variant to gene
pQTL
caQTL
sQTL
other
tissue
heart
37
20
21
5
3
1
2
1
kidney
29
14
16
10
7
1
2
1
1
lung
33
17
16
1
1
muscle of arm
33
16
16
1
1
small intestine
29
17
15
1
1
+ See 190 more…
See all biosamples
Download