Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
770
candidate regulatory elements
427
target gene predictions
425
chromatin state
186
accessible chromatin
111
eQTL
105
gene expression
81
histone modifications
74
Fine-mapped variants
48
variant allelic effects
33
binding sites
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
Date released
1135
September, 2022
544
February, 2021
100
March, 2020
62
January, 2020
60
May, 2020
52
January, 2022
52
June, 2020
48
February, 2020
46
August, 2021
26
February, 2023
25
February, 2024
25
May, 2021
23
March, 2024
17
November, 2022
14
August, 2017
10
November, 2019
9
May, 2019
8
April, 2019
6
March, 2023
5
October, 2019
3
September, 2018
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
Available data
1565
bed bed3+
405
bed bed9
207
tsv
120
bigWig
31
bigBed bed9
1
bam
Organism
2275
Homo sapiens
Biosample type
2415
primary cell
2277
tissue
2191
cell line
440
in vitro differentiated cells
3
stem cell
Organ
349
brain
306
musculature of body
301
kidney
236
limb
intestine
214
heart
181
lung
134
large intestine
114
pancreas
stomach
98
extraembryonic component
95
connective tissue
84
adipose tissue
84
blood vessel
84
vasculature
80
small intestine
70
eye
64
ureter
62
adrenal gland
61
epithelium
60
placenta
58
liver
48
thymus
42
artery
39
gonad
36
spinal cord
embryo
35
esophagus
34
spleen
25
nerve
25
skin of body
22
bone element
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
18
testis
15
prostate gland
13
breast
13
uterus
11
mouth
10
tongue
10
urinary bladder
10
vagina
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
2272
AMP
5
ITG
Genome assembly (visualization)
2092
hg19
649
GRCh38
3
hg18
organ_slims!
embryo
intestine
stomach
organ_slims!!
stomach
BIOSAMPLE
TYPE
2277 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
gene expression
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
differential activity
variant to gene
pQTL
caQTL
sQTL
other
tissue
heart
37
20
21
5
3
1
2
1
kidney
29
14
16
10
1
7
2
1
1
brain
29
16
18
2
2
1
3
1
1
lung
33
17
16
1
1
muscle of arm
33
16
16
1
1
+ See 229 more…
See all biosamples
Download