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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
624
ChIP-seq
Assay category
624
DNA binding
Target of assay
624
histone modification
623
histone
320
narrow histone mark
303
broad histone mark
187
control
94
transcription factor
28
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
164
October, 2019
124
August, 2017
89
May, 2019
70
November, 2017
60
April, 2019
35
May, 2024
30
October, 2018
27
May, 2020
12
October, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
522
bigWig
520
bed narrowPeak
466
bam
312
bigBed narrowPeak
186
tagAlign
74
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
618
Homo sapiens
Biosample type
624
tissue
237
primary cell
112
in vitro differentiated cells
38
cell line
2
stem cell
Organ
184
brain
95
heart
73
pancreas
70
liver
54
blood vessel
54
vasculature
49
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
20
kidney
6
spleen
4
gonad
ovary
2
eye
1
lymph node
1
pituitary gland
Project
622
AMP
2
T1D
Genome assembly (visualization)
494
GRCh38
438
hg19
Lab
589
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
organ_slims!
ovary
BIOSAMPLE
ASSAY
624 results
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Clear Filters
ChIP-seq
tissue
liver
65
islet of Langerhans
47
left cardiac atrium
35
subcutaneous abdominal adipose tissue
31
heart left ventricle
24
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