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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 123ChIP-seq
  • 93single cell RNA-seq
  • 39ATAC-seq
  • 27DNase-seq
  • 15total RNA-seq
  • 8WGBS
  • 3Hi-C
  • 3pCHi-C
  • 1RRBS
  • 1small RNA-seq
Assay category
  • 123DNA binding
  • 109Transcription
  • 66DNA accessibility
  • 9DNA methylation
  • 33D chromatin structure
Target of assay
  • 95histone
  • 95histone modification
  • 57broad histone mark
  • 38narrow histone mark
  • 16control
  • 12transcription factor
  • 10RNA binding protein
Date released
  • 92August, 2021
  • 57April, 2019
  • 40May, 2024
  • 36February, 2023
  • 27June, 2019
  • 21May, 2019
  • 20July, 2019
  • 8October, 2019
  • 7March, 2020
  • 3February, 2020
  • 2May, 2021
Available data
  • 173bed narrowPeak
  • 157bigWig
  • 132bam
  • 111tsv
  • 88bigBed narrowPeak
  • 27bed bed3+
  • 27bed broadPeak
  • 27bigBed broadPeak
  • 7bed bedMethyl
  • 7bigBed bedMethyl
  • 3bedpe bed3+
  • 3hic
Organism
  • 313Homo sapiens
Biosample type
  • 313tissue
  • 66cell line
  • 13primary cell
  • 1in vitro differentiated cells
Organ
  • 547connective tissue
  • 505pancreas
  • 488adipose tissue
  • 361liver
  • 313heart
  • 299kidney
  • 265brain
  • 158bone element
  • 133blood vessel
  • 133vasculature
  • 122limb
  • 82musculature of body
  • 73artery
  • 56eye
  • 43nerve
  • 25spleen
  • 20lung
  • 18ureter
  • 16skeleton
  • 15epithelium
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1pericardium
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 313AMP
Genome assembly (visualization)
  • 191GRCh38
  • 113hg19
Lab
  • 273AMP-T2D consortium
  • 40Patrick T. Ellinor, Broad
BIOSAMPLE
ASSAY

313 results

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Clear Filters
ChIP-seq
single cell RNA-seq
ATAC-seq
DNase-seq
total RNA-seq
WGBS
Hi-C
pCHi-C
RRBS
small RNA-seq
tissue
heart left ventricle35182334111
left cardiac atrium40181
coronary artery53621
heart141184111
heart right ventricle131711211
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