Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 103candidate regulatory elements
  • 102target gene predictions
  • 55chromatin state
  • 6accessible chromatin
  • 4histone modifications
  • 3eQTL
  • 3gene expression
  • 1binding sites
Date released
  • 152September, 2022
  • 57February, 2021
  • 45July, 2026
  • 6June, 2020
  • 4August, 2017
  • 4May, 2021
  • 3January, 2022
  • 3March, 2024
  • 2March, 2020
  • 1February, 2024
Available data
  • 223bed bed3+
  • 51bed bed9
  • 3tsv
Organism
  • 277Homo sapiens
Collection Tags
  • 153EpiMap
  • 52ENCODE
  • 45ENCODE-rE2G
  • 11ChIP-Atlas
  • 6DGA
  • 3GTEx
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
Biosample type
  • 277tissue
  • 58cell line
  • 23primary cell
Organ
  • 2731blood vessel
  • 2720vasculature
  • 2639bodily fluid
  • 2638blood
  • 2637vein
  • 569brain
  • 371kidney
  • 305musculature of body
  • 277intestine
  • 268heart
  • 236limb
  • 233lung
  • 162large intestine
  • 129stomach
  • 126pancreas
  • 122extraembryonic component
  • 96connective tissue
  • 93small intestine
  • 85adipose tissue
  • 82placenta
  • 77adrenal gland
  • 75eye
  • 73ureter
  • 65liver
  • 62muscle organ
  • 61epithelium
  • 57thymus
  • 52gonad
  • 47artery
  • 42spinal cord
  • 39spleen
  • 37esophagus
  • 35embryo
  • 30ovary
  • 30skin of body
  • 25nerve
  • 24thyroid gland
  • 23bone element
  • 22testis
  • 19skeleton
  • 18lymphoid tissue
  • 16prostate gland
  • 15breast
  • 15uterus
  • 13mouth
  • 12tongue
  • 12vagina
  • 11urinary bladder
  • 3pituitary gland
  • 2mammary gland
  • 2penis
  • 1embryonic structure
  • 1gallbladder
Project
  • 277AMP
Genome assembly (visualization)
  • 226hg19
  • 99GRCh38
BIOSAMPLE
TYPE

277 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
gene expression
binding sites
tissue
small intestine29301511
large intestine27281311
sigmoid colon101051
transverse colon89411
Peyer's patch7731
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego