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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 628ChIP-seq
Assay category
  • 628DNA binding
Target of assay
  • 628histone modification
  • 627histone
  • 324narrow histone mark
  • 303broad histone mark
  • 187control
  • 94transcription factor
  • 28RNA binding protein
  • 3other context
  • 3other post-translational modification
  • 2chromatin remodeller
  • 2nucleotide modification
Date released
  • 168October, 2019
  • 124August, 2017
  • 89May, 2019
  • 70November, 2017
  • 60April, 2019
  • 35May, 2024
  • 30October, 2018
  • 27May, 2020
  • 12October, 2017
  • 6January, 2019
  • 5December, 2017
  • 2March, 2020
Available data
  • 522bigWig
  • 520bed narrowPeak
  • 466bam
  • 312bigBed narrowPeak
  • 186tagAlign
  • 74fastq
  • 35bed broadPeak
  • 12bed bed3+
  • 1tagAlign bed3+
Organism
  • 622Homo sapiens
Biosample type
  • 628tissue
  • 237primary cell
  • 112in vitro differentiated cells
  • 38cell line
  • 2stem cell
Organ
  • 184brain
  • 95heart
  • 73pancreas
  • 70liver
  • 54blood vessel
  • 54vasculature
  • 49limb
  • 33connective tissue
  • 32adipose tissue
  • 25musculature of body
  • 24nerve
  • 20artery
  • 20kidney
  • 6spleen
  • 4gonad
  • 4ovary
  • 2eye
  • 1lymph node
  • 1pituitary gland
Project
  • 626AMP
  • 2T1D
Genome assembly (visualization)
  • 494GRCh38
  • 438hg19
Lab
  • 593AMP-T2D consortium
  • 35Patrick T. Ellinor, Broad
Audit category:
  • 2inconsistent ontology term
Audit category:
  • 8missing controlled_by
Audit category:
  • 6inconsistent control read length
  • 1inconsistent assembly
BIOSAMPLE
ASSAY

628 results

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Clear Filters
ChIP-seq
tissue
liver65
islet of Langerhans51
left cardiac atrium35
subcutaneous abdominal adipose tissue31
heart left ventricle24
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