Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Embedding Matrix

Click or enter search terms to filter the experiments included in the matrix.

Embeddings type
  • Gene expression
  • 9Accessible chromatin
Date released
  • 4April, 2025
  • 1August, 2021
  • 1February, 2021
  • 1July, 2025
  • 1March, 2024
  • 1September, 2021
Available data
  • 10h5ad
  • 7tsv
  • mtx
  • 1bed bed3
  • 1cloupe
  • 1rds
  • 1tbi
Organism
  • 9Homo sapiens
Biosample type
  • 9tissue
  • 1primary cell
Organ
  • 3pancreas
  • 2musculature of body
  • 1adipose tissue
  • 1artery
  • 1blood
  • 1blood vessel
  • 1bodily fluid
  • 1connective tissue
  • 1liver
  • 1lung
  • 1vasculature
Project
  • 7AMP
  • 1LungMap
  • 1T1D
Encyclopedia version
  • 1fusion_consented.snatac.h5ad
embeddings_type!
  • Gene expression
files.file_type!
  • mtx
BIOSAMPLE
TYPE

9 results

search-icontable-tab-icon
Clear Filters
Accessible chromatin
tissue
islet of Langerhans3
skeletal muscle2
artery1
liver1
lung1
primary cell
islet of Langerhans1
pancreas1
peripheral blood mononuclear cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego