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Schema
Embedding Matrix
Click or enter search terms to filter the experiments included in the matrix.
Embeddings type
52
Gene expression
10
Accessible chromatin
Date released
32
May, 2022
8
June, 2025
6
April, 2025
4
February, 2025
2
August, 2021
2
October, 2024
2
September, 2021
1
February, 2021
1
February, 2023
1
March, 2023
1
November, 2021
1
September, 2020
1
September, 2023
Available data
47
h5ad
11
rds
8
tsv
7
mtx
1
bed bed3
1
cloupe
1
tbi
Organism
58
Homo sapiens
Biosample type
56
tissue
7
primary cell
Organ
8
pancreas
7
musculature of body
6
connective tissue
5
adipose tissue
5
liver
4
heart
3
blood
3
bodily fluid
3
kidney
3
lung
2
bone element
2
epithelium
2
intestine
2
mouth
2
vasculature
1
artery
1
blood vessel
1
bone marrow
1
brain
1
eye
1
large intestine
1
lymph node
1
mammary gland
1
prostate gland
1
skin of body
1
small intestine
1
spleen
1
thymus
1
tongue
1
trachea
1
uterus
Project
55
AMP
2
LungMap
2
T1D
2
community
1
ENCODE
Genome assembly (visualization)
1
hg19
embeddings_underlying_assay!
10X scATAC-seq
tissue_term_name!
artery
BIOSAMPLE
TYPE
62 results
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Clear Filters
Gene expression
Accessible chromatin
tissue
heart
5
islet of Langerhans
2
3
liver
4
1
pancreas
4
1
skeletal muscle
3
1
+ See 29 more…
primary cell
islet of Langerhans
1
1
pancreas
1
1
peripheral blood mononuclear cell
1
1
cell
1
endothelial cell
1
+ See 3 more…
See all biosamples