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Embedding Matrix

Click or enter search terms to filter the experiments included in the matrix.

Embeddings type
  • 14Gene expression
  • 12Accessible chromatin
Date released
  • 8June, 2025
  • 4April, 2025
  • 3May, 2022
  • 2July, 2025
  • 2September, 2021
  • 1August, 2021
  • 1February, 2021
  • 1February, 2023
  • 1March, 2024
  • 1November, 2021
  • 1October, 2024
  • 1September, 2020
Available data
  • 15h5ad
  • 8tsv
  • 7rds
  • 6mtx
  • 1bed bed3
  • 1cloupe
  • 1tbi
Organism
  • 24Homo sapiens
Biosample type
  • 25tissue
  • 1primary cell
Organ
  • 7musculature of body
  • 5pancreas
  • 3artery
  • blood vessel
  • 3heart
  • 3vasculature
  • 2adipose tissue
  • 2connective tissue
  • 2liver
  • 2lung
  • 1blood
  • 1bodily fluid
  • 1bone element
  • 1brain
  • 1kidney
Project
  • 21AMP
  • 2LungMap
  • 1ENCODE
  • 1T1D
  • 1community
Genome assembly (visualization)
  • 1hg19
Encyclopedia version
  • 1fusion_consented.snatac.h5ad
  • 1fusion_consented.snrna_post_decontx.h5ad
embeddings_underlying_assay!
  • 10X scRNA-seq
organ_slims!
  • blood vessel
BIOSAMPLE
TYPE

26 results

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Clear Filters
Gene expression
Accessible chromatin
tissue
skeletal muscle32
heart4
islet of Langerhans4
liver11
lung11
primary cell
islet of Langerhans1
pancreas1
peripheral blood mononuclear cell1
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