Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Embedding Matrix
Click or enter search terms to filter the experiments included in the matrix.
Embeddings type
16
Gene expression
12
Accessible chromatin
Date released
10
June, 2025
6
April, 2025
3
May, 2022
2
September, 2021
1
August, 2021
1
February, 2021
1
February, 2023
1
March, 2024
1
November, 2021
1
October, 2024
1
September, 2020
Available data
15
h5ad
9
rds
9
tsv
6
mtx
1
bed bed3
1
cloupe
1
tbi
Organism
26
Homo sapiens
Biosample type
27
tissue
1
primary cell
Organ
5
musculature of body
5
pancreas
3
adipose tissue
3
artery
3
blood vessel
3
connective tissue
3
heart
3
vasculature
2
liver
2
lung
1
blood
1
bodily fluid
1
bone element
1
brain
1
kidney
Project
23
AMP
2
LungMap
1
ENCODE
1
T1D
1
community
Genome assembly (visualization)
1
hg19
embeddings_underlying_assay!
10X scRNA-seq
type!!
Model
BIOSAMPLE
TYPE
28 results
search-icon
table-tab-icon
Clear Filters
Gene expression
Accessible chromatin
tissue
heart
4
islet of Langerhans
4
artery
2
1
skeletal muscle
2
1
liver
1
1
+ See 9 more…
primary cell
islet of Langerhans
1
pancreas
1
peripheral blood mononuclear cell
1
See all biosamples