Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Embedding Matrix
Click or enter search terms to filter the experiments included in the matrix.
Embeddings type
25
Gene expression
12
Accessible chromatin
Date released
9
June, 2025
8
April, 2025
4
May, 2022
3
February, 2025
2
August, 2021
2
October, 2024
2
September, 2021
1
February, 2021
1
February, 2023
1
March, 2023
1
March, 2024
1
November, 2021
1
September, 2020
1
September, 2023
Available data
21
h5ad
12
rds
9
tsv
7
mtx
1
bed bed3
1
cloupe
1
tbi
Organism
33
Homo sapiens
Biosample type
35
tissue
3
primary cell
Organ
8
pancreas
6
musculature of body
4
artery
4
blood vessel
4
liver
4
vasculature
3
adipose tissue
3
connective tissue
3
heart
2
blood
2
bodily fluid
2
kidney
2
lung
1
bone element
1
brain
Project
30
AMP
2
LungMap
2
T1D
2
community
1
ENCODE
Genome assembly (visualization)
1
hg19
embeddings_underlying_assay!
Smart-seq
tissue_term_name!
fat pad
BIOSAMPLE
TYPE
37 results
search-icon
table-tab-icon
Clear Filters
Gene expression
Accessible chromatin
tissue
islet of Langerhans
2
4
artery
3
1
heart
4
liver
3
1
pancreas
3
1
+ See 9 more…
primary cell
islet of Langerhans
1
1
pancreas
1
1
peripheral blood mononuclear cell
1
1
immune system
1
See all biosamples