Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Embedding Matrix
Click or enter search terms to filter the experiments included in the matrix.
Embeddings type
8
Gene expression
5
Accessible chromatin
Date released
4
May, 2022
2
July, 2025
2
September, 2021
1
February, 2023
1
June, 2025
1
November, 2021
1
September, 2020
1
September, 2023
Available data
11
h5ad
5
mtx
5
tsv
3
rds
1
bed bed3
1
cloupe
1
tbi
Organism
12
Homo sapiens
Biosample type
11
tissue
1
primary cell
Organ
4
musculature of body
2
heart
2
lung
1
bone element
1
kidney
Project
10
AMP
2
LungMap
1
ENCODE
Genome assembly (visualization)
1
hg19
Encyclopedia version
1
fusion_consented.snatac.h5ad
1
fusion_consented.snrna_post_decontx.h5ad
embeddings_underlying_assay!
Smart-seq
tissue_term_name!
pancreas
BIOSAMPLE
TYPE
13 results
search-icon
table-tab-icon
Clear Filters
Gene expression
Accessible chromatin
tissue
heart
3
lung
1
1
skeletal muscle
1
1
skeletal muscle tissue
1
1
carotid canal
1
+ See 1 more…
primary cell
immune system
1
See all biosamples