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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 32pCHi-C
  • 15total RNA-seq
  • 10Hi-C
  • 4ATAC-seq
  • 3ChIP-seq
Assay category
  • 15Transcription
  • 103D chromatin structure
  • 4DNA accessibility
  • 3DNA binding
Target of assay
  • 3histone
  • 3histone modification
  • 3narrow histone mark
Date released
  • 715February, 2021
  • 411August, 2017
  • 406November, 2017
  • 399May, 2021
  • 341May, 2020
  • 319August, 2021
  • 314October, 2019
  • 218June, 2019
  • 205February, 2023
  • 200May, 2022
  • 168July, 2018
  • 120May, 2019
  • 108July, 2019
  • 94December, 2017
  • 88November, 2018
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 64March, 2020
  • 61November, 2019
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
Available data
  • 45tsv
  • 20bigWig
  • 16bam
  • 12bedpe bed3+
  • 10hic
  • 3bed narrowPeak
  • 2ibed
Organism
  • 64Homo sapiens
Biosample type
  • 40tissue
  • 11cell line
  • 8in vitro differentiated cells
  • 4stem cell
  • 1primary cell
Organ
  • 14pancreas
  • 7heart
  • 6epithelium
  • 5musculature of body
  • 4blood vessel
  • 4vasculature
  • 3liver
  • 2brain
  • 2connective tissue
  • 2intestine
  • 2kidney
  • 1adipose tissue
  • 1adrenal gland
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1lung
  • 1mammary gland
  • 1ovary
  • 1small intestine
  • 1spleen
  • 1stomach
  • 1thymus
  • 1urinary bladder
  • 1vein
Project
  • 57AMP
  • 7T1D
Genome assembly (visualization)
  • 32hg19
  • 16GRCh38
Lab
  • 64AMP-T2D consortium
Audit category:
  • 17inconsistent ontology term
files.file_type!!
  • csv
BIOSAMPLE
ASSAY

64 results

search-icontable-tab-icon
Clear Filters
pCHi-C
total RNA-seq
Hi-C
ATAC-seq
ChIP-seq
tissue
islet of Langerhans222
psoas muscle122
aorta111
heart left ventricle111
heart right ventricle111
cell line
EndoC_BH1221
early embryonic cell2
MCF-71
RCC 7860 VHL1
RCC 7860 vector1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)211
lymphocyte of B lineage (iPSC)111
embryonic stem cell1
stem cell
mesenchymal stem cell1
mesendoderm1
neural progenitor cell (neural stem cell)1
trophoblast1
primary cell
endothelial cell of umbilical vein1
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