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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
total RNA-seq
4
pCHi-C
2
ChIP-seq
1
ATAC-seq
1
GRO-seq
1
RRBS
Assay category
19
Transcription
2
DNA binding
1
DNA accessibility
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
21
October, 2019
4
February, 2023
1
February, 2020
1
January, 2018
1
July, 2019
Available data
bed narrowPeak
bam
35
bigWig
27
fastq
19
tsv
7
bed bed3+
6
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
28
Homo sapiens
Biosample type
26
tissue
1
in vitro differentiated cells
1
primary cell
Organ
106
heart
92
bone element
84
connective tissue
55
pancreas
47
adipose tissue
42
brain
39
liver
37
epithelium
27
eye
26
musculature of body
19
kidney
16
vasculature
15
blood vessel
8
limb
8
skeleton
5
gonad
5
ovary
4
artery
2
intestine
2
vein
1
adrenal gland
1
blood
1
bodily fluid
1
embryo
1
esophagus
1
large intestine
1
lung
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
28
AMP
Genome assembly (visualization)
1
hg18
1
hg19
Lab
28
AMP-T2D consortium
files.file_type!
bam
bed narrowPeak
BIOSAMPLE
ASSAY
28 results
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Clear Filters
total RNA-seq
pCHi-C
ChIP-seq
ATAC-seq
GRO-seq
RRBS
tissue
islet of Langerhans
14
4
2
1
retina
3
pigmented layer of retina
2
in vitro differentiated cells
pancreatic endoderm
1
primary cell
retinal pigment epithelial cell
1
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