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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
snATAC-seq
9
single cell RNA-seq
5
GRO-seq
3
ATAC-seq
1
Hi-C
Assay category
13
DNA accessibility
9
Transcription
1
3D chromatin structure
Date released
190
August, 2021
156
May, 2022
143
February, 2021
140
February, 2023
109
August, 2017
92
May, 2021
64
October, 2019
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
13
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
40
fastq
38
bigWig
bam
bed narrowPeak
30
bigBed narrowPeak
Organism
27
Homo sapiens
Biosample type
21
tissue
4
in vitro differentiated cells
2
cell line
1
stem cell
Organ
19
lung
1
adipose tissue
1
blood
1
bodily fluid
1
connective tissue
1
embryo
1
liver
1
musculature of body
Project
19
LungMap
9
AMP
Genome assembly (visualization)
5
hg18
3
hg19
Lab
19
Xin Sun, UCSD
9
AMP-T2D consortium
files.file_type!
bam
bed narrowPeak
BIOSAMPLE
ASSAY
28 results
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Clear Filters
snATAC-seq
single cell RNA-seq
GRO-seq
ATAC-seq
Hi-C
tissue
lung
10
9
adipose tissue
1
skeletal muscle tissue
1
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
cell line
GM12878
1
HepG2
1
stem cell
hESC
1
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