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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
48
gene expression
41
target gene predictions
33
differential activity
24
candidate regulatory elements
17
chromatin state
15
eQTL
12
accessible chromatin
7
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
47
March, 2023
39
September, 2022
33
May, 2021
28
February, 2021
10
January, 2021
9
March, 2020
8
August, 2021
7
August, 2018
7
February, 2024
7
November, 2021
4
January, 2022
4
June, 2020
4
May, 2020
3
August, 2017
2
February, 2020
2
January, 2020
1
April, 2019
1
February, 2023
1
January, 2018
Available data
159
bed bed3+
76
tsv
bigWig
14
bigBed narrowPeak
13
bed bed9
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
217
Homo sapiens
Biosample type
98
tissue
83
primary cell
33
cell line
3
in vitro differentiated cells
Organ
780
epithelium
616
kidney
445
brain
413
connective tissue
359
musculature of body
302
lung
278
intestine
238
vasculature
235
heart
230
limb
218
bodily fluid
217
pancreas
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
134
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
82
uterus
79
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
vagina
5
trachea
4
nose
1
pericardium
Project
198
AMP
10
T1D
7
ENCODE
2
community
Genome assembly (visualization)
126
hg19
28
GRCh38
files.file_type!
bam
bigWig
organ_slims!
vagina
BIOSAMPLE
TYPE
217 results
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Clear Filters
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
eQTL
accessible chromatin
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
islet of Langerhans
11
1
3
13
2
1
1
2
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
3
1
2
1
1
1
endocrine pancreas
4
7
4
primary cell
pancreatic ductal cell
3
3
3
1
1
2
1
pancreatic acinar cell
3
3
3
1
pancreatic delta cell
3
3
3
pancreatic alpha cell
3
2
3
pancreatic beta cell
3
2
3
+ See 11 more…
cell line
EndoC_BH1
8
1
3
7
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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