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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
99
candidate regulatory elements
85
target gene predictions
52
chromatin state
50
gene expression
33
differential activity
23
binding sites
20
accessible chromatin
19
histone modifications
18
eQTL
8
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
141
September, 2022
96
February, 2021
47
March, 2023
38
May, 2021
12
June, 2020
12
November, 2021
10
January, 2021
9
March, 2020
8
August, 2021
8
February, 2024
7
August, 2018
7
January, 2022
4
August, 2017
4
May, 2020
4
October, 2022
2
February, 2020
2
January, 2020
2
March, 2024
1
April, 2019
1
February, 2023
1
January, 2018
Available data
324
bed bed3+
78
tsv
bigWig
47
bed bed9
14
bigBed narrowPeak
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
416
Homo sapiens
Biosample type
178
primary cell
123
tissue
103
cell line
12
in vitro differentiated cells
Organ
770
epithelium
616
kidney
445
brain
405
connective tissue
359
musculature of body
302
lung
278
intestine
235
vasculature
233
heart
230
limb
218
bodily fluid
217
pancreas
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
132
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
82
uterus
79
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
19
mouth
18
lymphatic vessel
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
vagina
5
trachea
4
nose
1
pericardium
Project
392
AMP
12
ENCODE
10
T1D
2
community
Genome assembly (visualization)
320
hg19
70
GRCh38
files.file_type!
bam
bigWig
organ_slims!
vagina
BIOSAMPLE
TYPE
416 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
gene expression
differential activity
binding sites
accessible chromatin
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
primary cell
foreskin keratinocyte
11
4
4
foreskin fibroblast
6
2
1
4
1
2
keratinocyte
3
5
3
1
2
1
pancreatic ductal cell
3
3
3
1
1
2
1
fibroblast of dermis
4
4
3
1
+ See 24 more…
tissue
islet of Langerhans
1
3
11
2
2
1
13
1
2
2
2
body of pancreas
8
5
4
2
1
1
3
pancreas
5
5
3
1
2
1
1
1
endocrine pancreas
7
4
4
lower leg skin
6
2
2
+ See 6 more…
cell line
EndoC_BH1
1
8
3
7
1
GM23248
2
1
1
1
1
1
Panc1
2
2
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
+ See 21 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
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