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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ATAC-seq
41
WGBS
37
single cell RNA-seq
22
snATAC-seq
20
total RNA-seq
Assay category
92
DNA accessibility
57
Transcription
41
DNA methylation
Date released
269
August, 2021
204
February, 2023
176
May, 2022
137
February, 2021
122
May, 2021
89
August, 2017
63
October, 2019
59
September, 2020
58
May, 2020
47
March, 2020
47
September, 2023
40
May, 2024
26
July, 2019
23
February, 2020
19
April, 2020
16
January, 2021
14
May, 2023
14
November, 2017
10
November, 2020
8
October, 2017
7
August, 2020
7
January, 2018
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2022
1
December, 2018
Available data
134
zippedFastqFolder
38
bed narrowPeak
bam
24
fastq
20
bigWig
7
txt
1
bed bed3+
Organism
190
Homo sapiens
Biosample type
134
primary cell
56
tissue
Organ
80
epithelium
80
pancreas
40
liver
14
kidney
2
musculature of body
adipose tissue
1
connective tissue
Project
134
HPAP
56
AMP
Genome assembly (visualization)
21
hg19
11
GRCh38
Lab
134
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
14
Katalin Susztak, Upenn
2
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bam
csv
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
190 results
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Clear Filters
ATAC-seq
WGBS
single cell RNA-seq
snATAC-seq
total RNA-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
pancreatic acinar cell
4
tissue
liver
20
20
kidney
11
3
skeletal muscle tissue
1
1
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