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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ChIP-seq
3
Hi-C
2
ATAC-seq
2
RRBS
Assay category
4
DNA binding
3
3D chromatin structure
2
DNA accessibility
2
DNA methylation
Target of assay
4
histone
4
histone modification
4
narrow histone mark
Date released
5
July, 2019
3
October, 2019
2
November, 2017
1
February, 2023
Available data
bam
222
bigWig
203
bed narrowPeak
127
bigBed narrowPeak
tagAlign
47
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
11
Homo sapiens
Biosample type
7
tissue
4
primary cell
Organ
237
pancreas
198
kidney
197
epithelium
93
bone element
84
heart
78
liver
65
connective tissue
49
eye
41
vasculature
40
blood vessel
38
adipose tissue
35
artery
21
musculature of body
19
lung
11
brain
9
blood
9
bodily fluid
8
skeleton
5
limb
4
gonad
4
ovary
vein
1
bone marrow
1
embryo
1
lymph node
1
pericardium
1
pituitary gland
1
skin of body
1
thymus
Project
11
AMP
Genome assembly (visualization)
8
hg19
2
GRCh38
Lab
11
AMP-T2D consortium
files.file_type!
bam
tagAlign
tsv
organ_slims!
vein
BIOSAMPLE
ASSAY
11 results
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Clear Filters
ChIP-seq
Hi-C
ATAC-seq
RRBS
tissue
brain
1
1
dorsal plus ventral thalamus
1
islet of Langerhans
1
layer of hippocampus
1
middle frontal area 46
1
+ See 1 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
choroid plexus epithelial cell
1
See all biosamples
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