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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
1
DNA methylation
Target of assay
2
histone
histone modification
2
narrow histone mark
Date released
31
February, 2023
19
October, 2019
1
February, 2020
1
July, 2019
Available data
32
bed narrowPeak
bam
5
bigBed narrowPeak
5
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
52
Homo sapiens
Biosample type
51
tissue
1
primary cell
Organ
243
pancreas
210
kidney
207
epithelium
146
heart
93
bone element
87
liver
52
eye
51
vasculature
50
blood vessel
47
connective tissue
39
artery
22
brain
20
lung
20
musculature of body
18
adipose tissue
9
blood
9
bodily fluid
8
skeleton
7
limb
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
52
AMP
Genome assembly (visualization)
28
hg19
Lab
52
AMP-T2D consortium
files.file_type!
bam
tar
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
52 results
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Clear Filters
ATAC-seq
total RNA-seq
pCHi-C
RRBS
tissue
islet of Langerhans
1
14
4
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
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