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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
135
target gene predictions
127
candidate regulatory elements
100
accessible chromatin
77
binding sites
75
chromatin state
50
histone modifications
19
eQTL
16
variant allelic effects
8
gene expression
3
pQTL
2
caQTL
Date released
195
September, 2022
161
February, 2021
50
November, 2021
44
February, 2024
32
June, 2020
31
October, 2022
17
May, 2021
13
August, 2021
10
May, 2020
9
August, 2017
9
January, 2020
7
November, 2022
6
January, 2022
5
February, 2020
3
April, 2020
3
March, 2020
3
May, 2022
2
January, 2021
2
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
August, 2018
1
February, 2023
1
June, 2021
Available data
520
bed bed3+
66
bed bed9
tsv
55
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
612
Homo sapiens
Biosample type
255
primary cell
236
cell line
72
tissue
48
in vitro differentiated cells
1
stem cell
Organ
622
epithelium
401
kidney
399
brain
395
connective tissue
361
musculature of body
310
lung
286
intestine
227
limb
226
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
202
vasculature
198
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
127
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
553
AMP
50
ENCODE
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
596
hg19
167
GRCh38
2
hg18
files.file_type!
bam
tsv
organ_slims!
thymus
BIOSAMPLE
TYPE
612 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
binding sites
chromatin state
histone modifications
eQTL
variant allelic effects
gene expression
pQTL
caQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
1
10
1
fibroblast of lung
4
6
2
4
foreskin fibroblast
2
6
1
4
1
2
osteoblast
2
2
5
3
1
2
+ See 38 more…
cell line
K562
23
7
1
2
7
1
GM12878
8
2
1
2
2
1
GM06990
1
2
1
2
1
1
GM19240
2
1
1
2
1
1
HAP-1
2
2
1
1
1
1
+ See 38 more…
tissue
adipose tissue
8
7
2
1
6
4
1
omental fat pad
2
5
2
2
1
subcutaneous adipose tissue
2
2
1
5
1
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 7 more…
in vitro differentiated cells
adipocyte
6
4
4
1
6
1
mesenchymal stem cell
3
3
1
1
2
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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