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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
29
candidate regulatory elements
27
accessible chromatin
24
target gene predictions
18
chromatin state
15
binding sites
15
histone modifications
7
eQTL
5
variant allelic effects
4
gene expression
1
caQTL
Date released
52
September, 2022
27
February, 2021
17
February, 2024
10
August, 2021
7
March, 2020
7
November, 2021
6
June, 2020
3
May, 2020
3
May, 2021
2
August, 2017
2
January, 2020
2
May, 2022
2
May, 2024
1
April, 2020
1
January, 2022
1
November, 2019
1
October, 2022
1
September, 2018
Available data
117
bed bed3+
tsv
25
bigWig
16
bed bed9
3
csv
bam
1
bigBed bed9
Organism
145
Homo sapiens
Biosample type
63
primary cell
50
tissue
28
cell line
4
in vitro differentiated cells
Organ
632
epithelium
403
connective tissue
401
kidney
399
brain
361
musculature of body
310
lung
286
intestine
228
heart
227
limb
217
bodily fluid
206
blood
205
embryo
205
vasculature
202
skin of body
198
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
129
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
lymphatic vessel
19
nerve
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
137
AMP
7
ENCODE
1
LungMap
Genome assembly (visualization)
137
hg19
53
GRCh38
2
hg18
files.file_type!
bam
tsv
BIOSAMPLE
TYPE
145 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
gene expression
caQTL
primary cell
hepatocyte
2
8
3
1
1
4
2
4
bronchial epithelial cell
4
1
2
2
2
1
endothelial cell of hepatic sinusoid
6
6
hepatic stellate cell
2
3
1
1
1
1
club cell
2
1
+ See 2 more…
tissue
liver
13
4
10
8
1
2
7
1
right lobe of liver
2
1
1
cell line
HepG2
2
2
3
2
3
5
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
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