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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
total RNA-seq
10
ATAC-seq
6
WGBS
3
Hi-C
Assay category
53
Transcription
10
DNA accessibility
6
DNA methylation
3
3D chromatin structure
Date released
37
February, 2023
19
September, 2020
7
August, 2020
6
February, 2021
3
October, 2022
Available data
zippedFastqFolder
69
fastq
10
bigWig
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
72
Homo sapiens
Biosample type
72
primary cell
Organ
72
epithelium
72
pancreas
Project
72
HPAP
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
72
Klaus Kaestner, Upenn
49
AMP-T2D consortium
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
audit script error
files.file_type!
bam
zippedFastqFolder
BIOSAMPLE
ASSAY
72 results
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total RNA-seq
ATAC-seq
WGBS
Hi-C
primary cell
pancreatic alpha cell
42
7
6
1
pancreatic beta cell
11
3
1
pancreatic acinar cell
1
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