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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 5GRO-seq
  • 3single cell RNA-seq
  • 2WGBS
Assay category
  • 3Transcription
  • 2DNA methylation
Date released
  • 5January, 2018
  • 2August, 2017
  • 1November, 2018
  • 1September, 2018
  • 1September, 2020
Available data
  • 187fastq
  • bam
  • 160bigWig
  • 111bed narrowPeak
  • 88bigBed narrowPeak
  • 34tsv
  • 17bed bed3+
  • 4bed bedMethyl
  • 4bigBed bedMethyl
  • 3bed broadPeak
  • 2bigBed broadPeak
  • 2csv
  • 1zippedFastqFolder
Organism
  • 10Homo sapiens
Biosample type
  • 4in vitro differentiated cells
  • 3primary cell
  • 2tissue
  • 1stem cell
Organ
  • 1adipose tissue
  • 1connective tissue
  • 1embryo
  • 1liver
Project
  • 9AMP
  • 1HPAP
Genome assembly (visualization)
  • 5hg18
Lab
  • 9AMP-T2D consortium
  • 1Klaus Kaestner, Upenn
files.file_type!
  • bam
BIOSAMPLE
ASSAY

10 results

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GRO-seq
single cell RNA-seq
WGBS
in vitro differentiated cells
Posterior foregut1
definitive endodermal cell1
pancreatic endoderm1
primitive gut cell1
primary cell
pancreatic cell2
Langerhans cell1
tissue
adipose tissue1
liver1
stem cell
hESC1
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