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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 4RRBS
  • 2ChIP-seq
Assay category
  • 4DNA methylation
  • 2DNA binding
Target of assay
  • 1broad histone mark
  • 1histone
  • 1histone modification
  • 1transcription factor
Date released
  • 4August, 2017
  • 1November, 2017
  • 1October, 2017
Available data
  • 264fastq
  • bam
  • 215bigWig
  • 200bed narrowPeak
  • 148bigBed narrowPeak
  • 93bed broadPeak
  • 84bigBed broadPeak
  • 39tagAlign
  • 37bed bed3+
  • 4bed bedMethyl
  • 4bigBed bedMethyl
Organism
  • 6Homo sapiens
Biosample type
  • 4tissue
  • 1cell line
  • 1primary cell
Organ
  • 2liver
  • 2musculature of body
  • 1brain
Project
  • 6AMP
Genome assembly (visualization)
  • 4hg19
Lab
  • 6AMP-T2D consortium
Audit category:
  • 1missing controlled_by
files.file_type!
  • bam
BIOSAMPLE
ASSAY

6 results

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RRBS
ChIP-seq
tissue
skeletal muscle tissue2
brain1
liver1
cell line
HepG21
primary cell
skeletal muscle myoblast1
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