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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 39ATAC-seq
  • 16snATAC-seq
  • 5GRO-seq
  • 1Hi-C
  • 1single cell RNA-seq
Assay category
  • 55DNA accessibility
  • 13D chromatin structure
  • 1Transcription
Date released
  • 39May, 2022
  • 16February, 2021
  • 5January, 2018
  • 1December, 2018
  • 1September, 2020
Available data
  • 166fastq
  • bam
  • 110bigWig
  • 92bed narrowPeak
  • 76bigBed narrowPeak
  • 40zippedFastqFolder
  • 11bed bed3+
  • 5bed broadPeak
  • 5tsv
  • 4bigBed broadPeak
Organism
  • 62Homo sapiens
Biosample type
  • 56primary cell
  • 4in vitro differentiated cells
  • 1cell line
  • 1stem cell
Organ
  • 39epithelium
  • 39pancreas
  • 1embryo
  • 1liver
Project
  • 56HPAP
  • 6AMP
Genome assembly (visualization)
  • 5hg18
Lab
  • 56Klaus Kaestner, Upenn
  • 6AMP-T2D consortium
Audit category:
  • 16audit script error
files.file_type!
  • bam
BIOSAMPLE
ASSAY

62 results

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Clear Filters
ATAC-seq
snATAC-seq
GRO-seq
Hi-C
single cell RNA-seq
primary cell
pancreatic alpha cell22
Langerhans cell161
pancreatic beta cell13
pancreatic acinar cell4
in vitro differentiated cells
Posterior foregut1
definitive endodermal cell1
pancreatic endoderm1
primitive gut cell1
cell line
HepG21
stem cell
hESC1
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