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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
3
single cell RNA-seq
2
RNA microarray
Assay category
14
DNA binding
3
Transcription
Target of assay
13
histone
13
histone modification
9
narrow histone mark
4
broad histone mark
1
transcription factor
Date released
270
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
129
August, 2017
122
May, 2021
64
October, 2019
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
40
May, 2024
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
October, 2022
3
March, 2019
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
bam
339
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
9
tsv
3
tar
Organism
19
Homo sapiens
Biosample type
16
tissue
2
in vitro differentiated cells
1
cell line
Organ
13
brain
3
kidney
1
epithelium
1
liver
Project
19
AMP
Genome assembly (visualization)
1
hg19
Lab
19
AMP-T2D consortium
Audit category:
4
audit script error
2
inconsistent ontology term
files.file_type!
bam
lab.title!
Maike Sander, UCSD
BIOSAMPLE
ASSAY
19 results
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Clear Filters
ChIP-seq
single cell RNA-seq
RNA microarray
tissue
cingulate gyrus
6
layer of hippocampus
3
substantia nigra
2
caudate nucleus
1
kidney
1
+ See 3 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cell line
HepG2
1
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