Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
2
Hi-C
Assay category
14
DNA binding
2
3D chromatin structure
Target of assay
13
histone
13
histone modification
9
narrow histone mark
4
broad histone mark
1
transcription factor
Date released
270
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
129
August, 2017
122
May, 2021
64
October, 2019
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
40
May, 2024
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
October, 2022
3
March, 2019
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
0
June, 2019
Available data
bam
575
bigWig
560
bed narrowPeak
522
bigBed narrowPeak
324
fastq
257
bed broadPeak
251
bigBed broadPeak
187
bed bed3+
78
tagAlign
20
tsv
3
tar
2
bedpe bed3+
2
hic
Organism
16
Homo sapiens
Biosample type
14
tissue
2
cell line
Organ
13
brain
2
pancreas
1
epithelium
1
liver
Project
16
AMP
Genome assembly (visualization)
3
hg19
Lab
16
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bam
lab.title!
Maike Sander, UCSD
BIOSAMPLE
ASSAY
16 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
Hi-C
tissue
cingulate gyrus
6
layer of hippocampus
3
substantia nigra
2
caudate nucleus
1
islet of Langerhans
1
+ See 1 more…
cell line
EndoC_BH1
1
HepG2
1
See all biosamples
Download