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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
4
ATAC-seq
4
total RNA-seq
1
GRO-seq
1
pCHi-C
Assay category
4
DNA accessibility
4
Transcription
Date released
84
February, 2021
8
February, 2023
1
January, 2018
1
May, 2021
Available data
bam
88
txt
87
bigWig
72
tsv
27
fastq
22
bed narrowPeak
4
bed bed3
3
bed bed3+
Organism
94
Homo sapiens
Biosample type
92
tissue
1
in vitro differentiated cells
1
primary cell
Organ
257
pancreas
210
kidney
207
epithelium
182
heart
110
liver
93
bone element
91
connective tissue
54
eye
51
vasculature
50
blood vessel
49
adipose tissue
43
brain
39
artery
39
musculature of body
9
blood
9
bodily fluid
8
limb
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lung
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
93
AMP
1
T1D
Genome assembly (visualization)
4
hg19
1
hg18
Lab
93
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
files.file_type!
bam
month_released!
April, 2020
BIOSAMPLE
ASSAY
94 results
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Clear Filters
RNA microarray
ATAC-seq
total RNA-seq
GRO-seq
pCHi-C
tissue
bone element
84
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
in vitro differentiated cells
pancreatic endoderm
1
primary cell
megakaryocyte
1
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