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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
total RNA-seq
16
ATAC-seq
6
ChIP-seq
5
pCHi-C
Assay category
17
Transcription
16
DNA accessibility
6
DNA binding
Target of assay
6
histone
6
histone modification
6
narrow histone mark
Date released
25
October, 2019
17
February, 2023
1
February, 2020
1
March, 2020
Available data
18
bed narrowPeak
4
tsv
bam
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
Organism
44
Homo sapiens
Biosample type
44
tissue
Organ
237
pancreas
210
kidney
epithelium
182
heart
93
bone element
82
liver
54
eye
51
vasculature
50
blood vessel
43
brain
39
artery
37
connective tissue
20
lung
13
musculature of body
9
adipose tissue
9
blood
9
bodily fluid
8
limb
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
44
AMP
Genome assembly (visualization)
15
hg19
Lab
44
AMP-T2D consortium
files.file_type!
bam
month_released!
August, 2017
organ_slims!
epithelium
BIOSAMPLE
ASSAY
44 results
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total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
islet of Langerhans
14
1
6
4
retina
3
15
ovary
1
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