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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
5
MeRIP-seq
Assay category
23
DNA binding
Target of assay
193
histone
193
histone modification
101
broad histone mark
92
narrow histone mark
28
control
18
transcription factor
10
RNA binding protein
5
nucleotide modification
Date released
14
August, 2017
8
May, 2021
5
November, 2020
August, 2021
1
October, 2017
Available data
bam
149
fastq
59
tagAlign
23
bigWig
9
bed bed3+
3
tsv
Organism
28
Homo sapiens
Biosample type
15
tissue
7
in vitro differentiated cells
3
cell line
3
primary cell
Organ
11
pancreas
7
connective tissue
adipose tissue
3
epithelium
3
liver
3
musculature of body
1
brain
Project
28
AMP
Genome assembly (visualization)
3
hg19
Lab
15
AMP-T2D consortium
8
Kyle Gaulton, UCSD
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
files.file_type!
bam
month_released!
August, 2021
organ_slims!
adipose tissue
gonad
BIOSAMPLE
ASSAY
28 results
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Clear Filters
ChIP-seq
MeRIP-seq
tissue
islet of Langerhans
6
2
liver
3
skeletal muscle tissue
3
brain
1
in vitro differentiated cells
embryonic stem cell
5
adipocyte
2
cell line
EndoC_BH1
3
primary cell
CD8-positive, alpha-beta T cell
3
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