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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
4
ATAC-seq
4
total RNA-seq
1
pCHi-C
Assay category
4
DNA accessibility
4
Transcription
Date released
84
February, 2021
8
February, 2023
1
May, 2021
Available data
88
txt
bam
58
bigWig
58
tsv
8
bed narrowPeak
4
bed bed3
Organism
93
Homo sapiens
Biosample type
92
tissue
1
primary cell
Organ
247
pancreas
205
epithelium
93
bone element
80
kidney
74
heart
71
liver
70
connective tissue
52
eye
45
vasculature
44
blood vessel
37
adipose tissue
37
artery
32
musculature of body
31
brain
20
lung
9
blood
9
bodily fluid
8
skeleton
7
limb
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
92
AMP
1
T1D
Genome assembly (visualization)
4
hg19
Lab
92
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
files.file_type!
bam
month_released!
August, 2021
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
93 results
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RNA microarray
ATAC-seq
total RNA-seq
pCHi-C
tissue
bone element
84
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
primary cell
megakaryocyte
1
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