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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
18
total RNA-seq
4
pCHi-C
2
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
18
Transcription
2
DNA binding
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
31
February, 2023
21
October, 2019
February, 2020
1
July, 2019
Available data
33
bed narrowPeak
bam
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
53
Homo sapiens
Biosample type
52
tissue
1
primary cell
Organ
254
pancreas
210
kidney
206
epithelium
heart
109
liver
93
bone element
89
connective tissue
53
eye
48
vasculature
47
adipose tissue
47
blood vessel
37
artery
37
musculature of body
31
brain
20
lung
9
blood
9
bodily fluid
8
skeleton
5
gonad
5
limb
5
ovary
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spleen
1
stomach
1
urinary bladder
Project
53
AMP
Genome assembly (visualization)
28
hg19
Lab
53
AMP-T2D consortium
files.file_type!
bam
month_released!
February, 2020
November, 2019
organ_slims!
heart
BIOSAMPLE
ASSAY
53 results
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Clear Filters
ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
1
14
4
2
retina
15
2
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
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