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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
5
MeRIP-seq
Assay category
26
DNA binding
Target of assay
195
histone
195
histone modification
98
broad histone mark
97
narrow histone mark
31
control
29
transcription factor
11
RNA binding protein
5
nucleotide modification
Date released
14
August, 2017
8
May, 2021
5
November, 2020
4
August, 2021
October, 2017
Available data
bam
147
fastq
65
tagAlign
23
bigWig
9
bed bed3+
3
tsv
Organism
31
Homo sapiens
Biosample type
14
tissue
7
cell line
7
in vitro differentiated cells
3
primary cell
Organ
11
pancreas
7
connective tissue
7
liver
adipose tissue
3
epithelium
3
musculature of body
Project
31
AMP
Genome assembly (visualization)
3
hg19
Lab
14
AMP-T2D consortium
8
Kyle Gaulton, UCSD
5
Rohit N. Kulkarni, M.D., Ph.D.
4
Bing Ren, UCSD
Audit category:
3
inconsistent ontology term
files.file_type!
bam
month_released!
October, 2017
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
31 results
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Clear Filters
ChIP-seq
MeRIP-seq
tissue
islet of Langerhans
6
2
liver
3
skeletal muscle tissue
3
cell line
HepG2
4
EndoC_BH1
3
in vitro differentiated cells
embryonic stem cell
5
adipocyte
2
primary cell
CD8-positive, alpha-beta T cell
3
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