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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
21
ATAC-seq
17
pCHi-C
9
total RNA-seq
1
DNAme array
Assay category
75
DNA binding
21
DNA accessibility
9
Transcription
1
DNA methylation
Target of assay
55
histone
55
histone modification
32
broad histone mark
23
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
270
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
129
August, 2017
122
May, 2021
64
October, 2019
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
40
May, 2024
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
368
bigWig
bam
198
bed narrowPeak
173
tsv
90
tagAlign
64
bigBed narrowPeak
2
bed bed3+
Organism
123
Homo sapiens
Biosample type
57
primary cell
47
in vitro differentiated cells
16
cell line
3
tissue
Organ
17
pancreas
16
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
heart
1
thymus
Project
106
AMP
17
T1D
Genome assembly (visualization)
41
hg19
Lab
100
Kyle Gaulton, UCSD
23
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
files.file_type!
bam
month_released!
April, 2018
BIOSAMPLE
ASSAY
123 results
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Clear Filters
ChIP-seq
ATAC-seq
pCHi-C
total RNA-seq
DNAme array
primary cell
CD8-positive, alpha-beta T cell
33
1
2
monocyte
1
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
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in vitro differentiated cells
embryonic stem cell
37
5
5
cell line
EndoC_BH1
16
tissue
heart left ventricle
1
pancreas
1
thymus
1
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