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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
10
snATAC-seq
9
single cell RNA-seq
7
WGBS
6
RRBS
1
DNase-seq
Assay category
115
DNA binding
13
DNA methylation
11
DNA accessibility
9
Transcription
Target of assay
96
histone
96
histone modification
60
broad histone mark
36
narrow histone mark
19
control
Date released
270
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
129
August, 2017
122
May, 2021
64
October, 2019
59
September, 2020
May, 2020
48
March, 2020
47
September, 2023
40
May, 2024
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
287
fastq
bam
272
bigWig
142
bed narrowPeak
89
tsv
85
tagAlign
42
bigBed narrowPeak
41
bed broadPeak
33
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
147
Homo sapiens
Biosample type
133
tissue
14
in vitro differentiated cells
1
primary cell
Organ
54
connective tissue
40
adipose tissue
28
liver
26
musculature of body
20
pancreas
19
lung
Project
129
AMP
19
LungMap
Genome assembly (visualization)
24
hg19
Lab
129
AMP-T2D consortium
19
Xin Sun, UCSD
files.file_type!
bam
month_released!
March, 2023
May, 2020
BIOSAMPLE
ASSAY
148 results
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ChIP-seq
snATAC-seq
single cell RNA-seq
WGBS
RRBS
DNase-seq
tissue
subcutaneous abdominal adipose tissue
36
3
liver
23
3
1
skeletal muscle tissue
22
4
islet of Langerhans
20
lung
10
9
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in vitro differentiated cells
adipocyte
14
primary cell
skeletal muscle myoblast
1
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