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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 84RNA microarray
  • 27snATAC-seq
  • 18single cell RNA-seq
  • 6WGBS
  • 4ATAC-seq
  • 3snDrop-seq
  • 1pCHi-C
Assay category
  • 31DNA accessibility
  • 18Transcription
  • 6DNA methylation
Date released
  • 270August, 2021
  • 205February, 2023
  • 176May, 2022
  • 143February, 2021
  • 129August, 2017
  • 122May, 2021
  • 64October, 2019
  • 59September, 2020
  • 58May, 2020
  • 48March, 2020
  • 47September, 2023
  • 40May, 2024
  • 26July, 2019
  • 25February, 2020
  • 19April, 2020
  • 16January, 2021
  • 15May, 2023
  • 14November, 2017
  • 10November, 2020
  • 8January, 2018
  • 8October, 2017
  • 7August, 2020
  • 5December, 2019
  • 5March, 2023
  • 4July, 2018
  • 4March, 2019
  • 4October, 2022
  • 2November, 2019
  • 1April, 2019
  • 1August, 2018
  • 1August, 2022
  • 1December, 2018
  • 1November, 2018
  • 1September, 2018
Available data
  • bam
  • 559tsv
  • 551bigWig
  • 89txt
  • 45fastq
  • 23bed narrowPeak
  • 8tagAlign
  • 6csv
  • 4bed bedgraph
  • 2bed bed3
  • 2bed bed3+
Organism
  • 143Homo sapiens
Biosample type
  • 93tissue
  • 45primary cell
  • 4in vitro differentiated cells
  • 1cell line
Organ
  • 84bone element
  • 8kidney
  • 6epithelium
  • 6pancreas
  • 4connective tissue
  • 2liver
Project
  • 98AMP
  • 45HPAP
Genome assembly (visualization)
  • 5hg19
Lab
  • 98AMP-T2D consortium
  • 45Klaus Kaestner, Upenn
Audit category:
  • 84inconsistent ontology term
  • 32audit script error
files.file_type!
  • bam
BIOSAMPLE
ASSAY

143 results

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Clear Filters
RNA microarray
snATAC-seq
single cell RNA-seq
WGBS
ATAC-seq
snDrop-seq
pCHi-C
tissue
bone element84
kidney5
kidney (Cortex-Medulla)1
kidney (cortex)1
kidney (medulla)1
primary cell
Langerhans cell2712
pancreatic alpha cell6
in vitro differentiated cells
adipocyte4
cell line
HepG21
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