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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
snATAC-seq
3
ATAC-seq
1
Hi-C
1
single cell RNA-seq
Assay category
19
DNA accessibility
1
3D chromatin structure
1
Transcription
Date released
268
August, 2021
153
February, 2023
137
February, 2021
129
August, 2017
106
May, 2021
96
May, 2022
61
October, 2019
58
May, 2020
47
September, 2023
45
March, 2020
40
May, 2024
40
September, 2020
25
February, 2020
19
April, 2020
18
July, 2019
16
January, 2021
15
May, 2023
14
November, 2017
8
January, 2018
8
October, 2017
5
March, 2023
4
December, 2019
4
July, 2018
4
March, 2019
4
November, 2020
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
November, 2019
1
October, 2022
1
September, 2018
Available data
89
fastq
bam
80
bigWig
73
bed narrowPeak
73
bigBed narrowPeak
10
bed broadPeak
9
bed bed3+
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
bedpe
1
csv
1
hic
Organism
21
Homo sapiens
Biosample type
12
tissue
9
primary cell
Organ
12
pancreas
8
blood
8
bodily fluid
Project
16
T1D
5
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
16
Kyle Gaulton, UCSD
2
Bing Ren, UCSD
1
AMP-T2D consortium
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
files.file_type!
bam
organ_slims!
epithelium
BIOSAMPLE
ASSAY
21 results
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Clear Filters
snATAC-seq
ATAC-seq
Hi-C
single cell RNA-seq
tissue
islet of Langerhans
4
3
1
pancreas
4
primary cell
peripheral blood mononuclear cell
8
pancreatic cell
1
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