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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
MeRIP-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
Hi-C
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
4
Transcription
1
3D chromatin structure
Target of assay
5
control
5
nucleotide modification
Date released
268
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
100
May, 2021
93
August, 2017
59
September, 2020
58
May, 2020
47
March, 2020
47
September, 2023
41
October, 2019
26
July, 2019
25
February, 2020
25
May, 2024
19
April, 2020
16
January, 2021
15
May, 2023
10
November, 2020
8
January, 2018
7
August, 2020
7
October, 2017
5
December, 2019
5
March, 2023
5
November, 2017
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
bam
5
bigWig
4
tsv
2
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
hic
Organism
11
Homo sapiens
Biosample type
8
cell line
4
tissue
2
stem cell
1
primary cell
Organ
10
pancreas
6
epithelium
Project
10
AMP
4
community
1
ITG
Genome assembly (visualization)
1
GRCh38
Lab
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
1
ITG
Audit category:
6
inconsistent ontology term
files.file_type!
bam
organ_slims!
esophagus
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
15 results
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Clear Filters
MeRIP-seq
CRISPR RNA-seq
CRISPRi RNA-seq
Hi-C
shRNA RNA-seq
siRNA RNA-seq
cell line
EndoC_BH1
6
EndoC-BH1
1
1
tissue
islet of Langerhans
4
stem cell
SB Ad3.1
1
1
primary cell
chondrocytes
1
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