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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
11
ATAC-seq
3
single cell RNA-seq
1
total RNA-seq
Assay category
14
DNA binding
11
DNA accessibility
4
Transcription
Target of assay
13
histone
13
histone modification
9
narrow histone mark
4
broad histone mark
1
transcription factor
Date released
270
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
129
August, 2017
121
May, 2021
63
October, 2019
59
September, 2020
58
May, 2020
47
March, 2020
47
September, 2023
40
May, 2024
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
29
Homo sapiens
Biosample type
28
tissue
1
cell line
Organ
14
kidney
13
brain
1
adipose tissue
1
connective tissue
1
liver
Project
29
AMP
Genome assembly (visualization)
12
GRCh38
2
hg19
Lab
15
AMP-T2D consortium
14
Katalin Susztak, Upenn
files.file_type!
bam
organ_slims!
bone marrow
vein
BIOSAMPLE
ASSAY
29 results
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Clear Filters
ChIP-seq
ATAC-seq
single cell RNA-seq
total RNA-seq
tissue
kidney
11
3
cingulate gyrus
6
layer of hippocampus
3
substantia nigra
2
adipose tissue
1
+ See 2 more…
cell line
HepG2
1
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