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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 23ChIP-seq
  • 16ATAC-seq
  • 14total RNA-seq
  • 5Hi-C
  • 4pCHi-C
  • 2DNase-seq
Assay category
  • 23DNA binding
  • 18DNA accessibility
  • 14Transcription
  • 53D chromatin structure
Target of assay
  • 23histone
  • 23histone modification
  • 23narrow histone mark
Date released
  • 270August, 2021
  • 205February, 2023
  • 176May, 2022
  • 143February, 2021
  • 129August, 2017
  • 122May, 2021
  • 64October, 2019
  • 59September, 2020
  • 58May, 2020
  • 48March, 2020
  • 47September, 2023
  • 40May, 2024
  • 26July, 2019
  • 25February, 2020
  • 19April, 2020
  • 16January, 2021
  • 15May, 2023
  • 14November, 2017
  • 10November, 2020
  • 8January, 2018
  • 8October, 2017
  • 7August, 2020
  • 5December, 2019
  • 5March, 2023
  • 4July, 2018
  • 4March, 2019
  • 4October, 2022
  • 2November, 2019
  • 1April, 2019
  • 1August, 2018
  • 1August, 2022
  • 1December, 2018
  • 1November, 2018
  • 1September, 2018
Available data
  • bam
  • 207bigWig
  • 189bed narrowPeak
  • 70bigBed narrowPeak
  • 49tagAlign
  • 16tsv
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 8bed bed3+
  • 4hic
  • 3bedpe bed3+
  • 1hdf5
  • 1tagAlign bed3+
  • 1tar
Organism
  • 64Homo sapiens
Biosample type
  • 56tissue
  • 4in vitro differentiated cells
  • 3primary cell
  • 1cell line
Organ
  • 21eye
  • 4connective tissue
  • 4gonad
  • 4ovary
  • 4pancreas
  • 3brain
  • 3epithelium
  • 2kidney
  • 1adipose tissue
  • 1blood vessel
  • 1heart
  • 1limb
  • 1lymph node
  • 1pituitary gland
  • 1skin of body
  • 1vasculature
  • 1vein
Project
  • 64AMP
Genome assembly (visualization)
  • 10hg19
  • 3GRCh38
Lab
  • 64AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
  • 1audit script error
Audit category:
  • 1inconsistent assembly
files.file_type!
  • bam
BIOSAMPLE
ASSAY

64 results

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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
pCHi-C
DNase-seq
tissue
islet of Langerhans2113144
adipose tissue1
dorsal plus ventral thalamus1
heart1
planum polare1
in vitro differentiated cells
adipocyte2
cardiac precursors (cardiac muscle cell)1
cardiomyocytes (cardiac muscle cell)1
primary cell
endothelial cell of umbilical vein1
kidney glomerular epithelial cell1
kidney tubule cell1
cell line
Panc11
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