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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
5
MeRIP-seq
Assay category
43
DNA binding
Target of assay
232
histone
232
histone modification
123
broad histone mark
109
narrow histone mark
37
control
29
transcription factor
11
RNA binding protein
5
nucleotide modification
Date released
19
August, 2017
13
May, 2021
5
August, 2021
5
May, 2024
5
November, 2020
1
October, 2017
Available data
bam
257
fastq
129
bigWig
105
bed narrowPeak
93
bigBed narrowPeak
68
tagAlign
11
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
3
tsv
1
tar
Organism
48
Homo sapiens
Biosample type
25
tissue
12
in vitro differentiated cells
8
cell line
3
primary cell
Organ
11
pancreas
8
liver
7
connective tissue
5
adipose tissue
5
heart
3
epithelium
3
musculature of body
1
brain
Project
48
AMP
Genome assembly (visualization)
5
GRCh38
4
hg19
Lab
20
AMP-T2D consortium
13
Kyle Gaulton, UCSD
5
Bing Ren, UCSD
5
Patrick T. Ellinor, Broad
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
files.file_type!
bam
organ_slims!
skin of body
BIOSAMPLE
ASSAY
48 results
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Clear Filters
ChIP-seq
MeRIP-seq
tissue
islet of Langerhans
6
2
left cardiac atrium
5
subcutaneous abdominal adipose tissue
5
liver
3
skeletal muscle tissue
3
+ See 1 more…
in vitro differentiated cells
embryonic stem cell
10
adipocyte
2
cell line
HepG2
5
EndoC_BH1
3
primary cell
CD8-positive, alpha-beta T cell
3
See all biosamples
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